The law
CGST Act 2017, Sec 37 and Rule 59
Details of outward supplies to be furnished in GSTR-1; monthly filers by the 11th of the next monthSource
CGST Act 2017, Sec 39 and Rule 61
Monthly return GSTR-3B with payment of tax by the 20th of the next monthSource
CGST Act 2017, Sec 47 with Notifications 19/2021-CT and 20/2021-CT
Late fee ₹50 a day (₹20 for nil returns), capped at ₹500 for nil returns and at ₹2,000, ₹5,000 or ₹10,000 by previous year turnover slabSource
CGST Act 2017, Sec 50(1) and Rule 88B
Interest at 18 percent a year on tax paid late, only on the part paid in cashSource
GSTN advisory dated 7 June 2025
From the July 2025 tax period, the liability auto-populated in GSTR-3B from GSTR-1, GSTR-1A and IFF is not editable; corrections go through GSTR-1A before filing GSTR-3BSource
CGST Act 2017, Sec 37(5) and 39(11), Notification 28/2023-CT
GSTR-1 and GSTR-3B cannot be filed after three years from their due date; the portal enforces the barSource
CGST Rules 2017, Rule 138E
E-way bill generation is blocked if GSTR-3B is not filed for two consecutive periodsSource
Notification 10/2023-CT
E-invoicing (IRN) is mandatory for B2B invoices where aggregate turnover exceeded ₹5 crore in any year from 2017-18, from 1 August 2023Source
Government fee
No government fee for filing GSTR-1 or GSTR-3B. Tax is paid through the electronic cash and credit ledgers in GSTR-3B. Source: https://taxgarden.in/blog/gst-late-fee-interest-penalty-gstr-3b-gstr-1-gstr-9-guide
Late fee or penalty
Sec 47: ₹50 a day (₹25 CGST plus ₹25 SGST) for each of GSTR-1 and GSTR-3B; ₹20 a day for nil returns. Caps (Notifications 19/2021-CT and 20/2021-CT): nil return ₹500; others ₹2,000 if previous year turnover up to ₹1.5 crore, ₹5,000 for ₹1.5 crore to ₹5 crore, ₹10,000 above ₹5 crore. Late fee and interest are paid only in cash. Interest under Sec 50(1) at 18 percent a year on the net cash liability. Source: https://taxgarden.in/blog/gst-late-fee-interest-penalty-gstr-3b-gstr-1-gstr-9-guide