GST

Late fee when GSTR-9C is filed after GSTR-9

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Yes. Circular 246/03/2025-GST says the annual return is complete only when GSTR-9C (where required) is also filed. Late fee under Sec 47(2) runs from the due date until 9C is filed, and is charged once, not separately.

Provisions

Circular 246/03/2025-GST; Sec 47(2), CGST Act 2017; Notification 07/2023-CT

Analysis

If you filed GSTR-9 on 20 December but GSTR-9C on 20 February, the delay counted is 51 days from 31 December. For turnover of ₹8 crore, the fee is ₹100 a day (CGST plus SGST), about ₹5,100, within the 0.04 percent cap of ₹32,000. If GSTR-9 itself was late too, the fee is computed once on the later date.

Close

  1. Check the date GSTR-9 and GSTR-9C were filed.
  2. Count delay from the due date to the 9C filing date.
  3. Apply the slab rate for your turnover with its cap.
  4. Pay the late fee in cash when filing.

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